rOpenSci | Citations

Package Citations

We manually curate a dataset of all citations of our packages. Find below a regularly updated random sample as well as a searchable table of all citations.

If you use one of our packages, please cite it. E.g. if you use the magick package, run citation("magick") in your R console to find the appropriate text.

Title Year Authors Journal Package
Spatial Gaps in Global Biodiversity Information and the Role of Citizen Science 2016 Amano et al. BioScience rgbif
A botanical inventory of forest on karstic limestone and metamorphic substrate in the Chiquibul Forest, Belize, with focus on woody taxa 2015 Baden et al. Edinburgh Journal of Botany taxize
Biodiversity ensures plant-pollinator phenological synchrony against climate change 2013 Bartomeus et al. Ecol Lett rgbif
Discovering and developing primary biodiversity data from social networking sites: A novel approach 2014 Barve Ecological Informatics rgbif
Retrieving taxa names from large biodiversity data collections using a flexible matching workflow 2015 Vanden Berghe et al. Ecological Informatics taxize
TR8: an R package for easily retrieving plant species traits 2015 Bocci Methods in Ecology and Evolution taxize
A macro-ecological perspective on crassulacean acid metabolism (CAM) photosynthesis evolution in Afro-Madagascan drylands: Eulophiinae orchids as a case study 2015 Bone et al. New Phytol rgbif
Near real time weather and ocean model data access with rNOMADS 2015 Bowman & Lees Computers & Geosciences rnoaa
Beyond species-specific assessments: an analysis and validation of environmental distance metrics for non-indigenous species risk assessment 2015 Bradie et al. Biological Invasions taxize
A preliminary inventory of the catfishes of the lower Rio Nhamundá, Brazil (Ostariophysi, Siluriformes 2015 Collins et al. Biodiversity Data Journal rgbif
Co-extinction in a host-parasite network: identifying key hosts for network stability 2015 Dallas & Cornelius Scientific Reports helminthR
The changing patterns of plant naturalization in Australia 2015 Dodd et al. Diversity Distrib taxize
R for all (I): Introduction to the new age of biological analyses 2013 Drozd & Šipoš Casopis Slezskeho Zemskeho Muzea A rgbif, rdryad, rfisheries, RMendeley, treeBASE, rfishbase, taxize, rsnsps, rvertnet, rentrez
Synthesis and comparative analysis of physiological tolerance and life-history growth traits of marine aquaculture species 2016 Froehlich et al. Aquaculture rfishbase
taxize: taxonomic search and retrieval in R 2013 Chamberlain & Szöcs F1000Research taxize
2016 Hartgerink et al. PeerJ rplos
Comparative genomics in the Asteraceae reveals little evidence for parallel evolutionary change in invasive taxa 2015 Hodgins et al. Mol Ecol taxize
SDMdata: A Web-Based Software Tool for Collecting Species Occurrence Records 2015 Kong et al. PLoS ONE rgbif
Data integration in biological research: an overview 2015 Lapatas et al. J of Biol Res-Thessaloniki taxize
A pharyngeal jaw evolutionary innovation facilitated extinction in Lake Victoria cichlids 2015 McGee et al. Science rfishbase
camtrapR: an R package for efficient camera trap data management 2016 Niedballa et al. Methods in Ecology and Evolution taxize
NoSQL Data Model for Semi-automatic Integration of Ethnomedicinal Plant Data from Multiple Sources 2014 Ningthoujam et al. Phytochemical Analysis taxize
Dataset of Passerine bird communities in a Mediterranean high mountain (Sierra Nevada, Spain 2016 Pérez-Luque et al. ZK taxize
The macroevolution of climatic niches and its role in ant diversification 2016 PIE Ecological Entomology AntWeb
Evolutionarily Stable Strategies for Fecundity and Swimming Speed of Fish 2016 Plank et al. Bull Math Biol rfishbase
Best publishing practices to improve user confidence in scientific software 2015 Poisot IEE taxize
Are all species necessary to reveal ecologically important patterns? 2014 Pos et al. Ecology and Evolution taxize
How predation shaped fish: the impact of fin spines on body form evolution across teleosts 2015 Price et al. Proc. R. Soc. B rfishbase
Australian acacias as invasive species: lessons to be learnt from regions with long planting histories 2015 Richardson et al. Southern Forests: a Journal of Forest Science rgbif
Non-native species modify the isotopic structure of freshwater fish communities across the globe 2015 Sagouis et al. Ecography rfishbase
Adaptive plasticity and niche expansion in an invasive thistle 2015 Turner et al. Ecology and Evolution rgbif
paleobioDB: an R package for downloading, visualizing and processing data from the Paleobiology Database 2014 Varela et al. Ecography paleobioDB
Variation in trait trade-offs allows differentiation among predefined plant functional types: implications for predictive ecology 2015 Verheijen et al. New Phytol rgbif
Some thoughts on best publishing practices for scientific software 2015 White IEE rplos
speciesgeocodeR: An R package for linking species occurrences, user-defined regions and phylogenetic trees for biogeography, ecology and evolution 2015 Zizka & Antonelli Cold Spring Harbor Laboratory rgbif
Pulmonary Artery Denervation Reduces Pulmonary Artery Pressure and Induces Histological Changes in an Acute Porcine Model of Pulmonary Hypertension 2015 Rothman et al. Circulation: Cardiovascular Interventions plotly
Long-lasting effects of land use history on soil fungal communities in second-growth tropical rain forests 2016 Bachelot et al. Ecol Appl taxize
Tracking the history of an invasion: the freshwater croakers (Teleostei: Sciaenidae) in South America 2014 Boeger et al. Zool Scr rfishbase
Prestoration: using species in restoration that will persist now and into the future 2016 Butterfield et al. Restoration Ecology rgbif
Niche dynamics of alien species do not differ among sexual and apomictic flowering plants 2015 Dellinger et al. New Phytol rgbif
Late Quaternary vegetation dynamics from central parts of the Madeira River in Brazil 2015 Feitosa et al. Acta Botanica Brasilica rgbif
Climatological correlates of seed size in Amazonian forest trees 2015 Malhado et al. Journal of Vegetation Science rgbif
A trait-based metric sheds new light on the nature of the body size-depth relationship in the deep sea 2016 Mindel et al. J Anim Ecol rfishbase
Evolutionary Origin of the Scombridae (Tunas and Mackerels): Members of a Paleogene Adaptive Radiation with 14 Other Pelagic Fish Families 2013 Miya et al. PLoS ONE rfishbase
Dataset of Phenology of Mediterranean high-mountain meadows flora (Sierra Nevada, Spain 2015 Pérez-Luque et al. PhytoKeys taxize
Synthetic datasets and community tools for the rapid testing of ecological hypotheses 2015 Poisot et al. Ecography taxize
Phylogenetic insights into the history and diversification of fishes on reefs 2015 Price et al. Coral Reefs rfishbase
geoknife: reproducible web-processing of large gridded datasets 2015 Read et al. Ecography ropensci, paleobioDB
Climate seasonality limits leaf carbon assimilation and wood productivity in tropical forests 2016 Wagner et al. Biogeosciences taxize
Evolutionary signals of symbiotic persistence in the legume–rhizobia mutualism 2015 Werner et al. Proc Natl Acad Sci USA rgbif
Biogeo: an R package for assessing and improving data quality of occurrence record datasets 2016 Robertson et al. Ecography rgbif
Phylogenetic systematics of leaffishes - Teleostei: Polycentridae, Nandidae 2015 Collins et al. Journal of Zoological Systematics and Evolutionary Research rfishbase
Global assessment of arbuscular mycorrhizal fungus diversity reveals very low endemism 2015 Davison et al. Science rgbif
Pollen assemblage richness does not reflect regional plant species richness: a cautionary tale 2013 Goring et al. Journal of Ecology ritis
Dynamics of Near-Coastal Fish Assemblages following the Deepwater Horizon Oil Spill in the Northern Gulf of Mexico 2015 Schaefer et al. Transactions of the American Fisheries Society rfishbase
MonoPhy : a simple R package to find and visualize monophyly issues 2016 Schwery & O’Meara PeerJ Computer Science taxize
A quantitative synthesis of the importance of variables used in MaxEnt species distribution models 2016 Bradie & Leung Journal of Biogeography taxize
Taxonomic similarity, more than contact opportunity, explains novel plant-pathogen associations between native and alien taxa 2016 Bufford et al. New Phytol taxize
Semi-Automated Identification of Ontological Labels in the Biomedical Literature with goldi 2016 Cole et al. Cold Spring Harbor Laboratory pdftools
Measures of biologically relevant environmental heterogeneity improve prediction of regional plant species richness 2016 Cramer & Verboom Journal of Biogeography taxize
Plant Distribution Data Show Broader Climatic Limits than Expert-Based Climatic Tolerance Estimates 2016 Curtis & Bradley PLOS ONE rgbif
A simple automated system for appetitive conditioning of zebrafish in their home tanks 2017 Doyle et al. Behavioural Brain Research plotly
Climate change will increase the naturalization risk from garden plants in Europe 2016 Dullinger et al. Global Ecol rgbif
MetacodeR: An R package for manipulation and heat tree visualization of community taxonomic data from metabarcoding 2016 Foster et al. Cold Spring Harbor Laboratory taxize
Is citizen science an open science in the case of biodiversity observations? 2016 Groom et al. Journal of Applied Ecology rgbif
Using evolutionary tools to search for novel psychoactive plants 2016 Halse-Gramkow et al. Plant Genetic Resources taxize
Climate Warming and Seasonal Precipitation Change Interact to Limit Species Distribution Shifts across Western North America 2016 Harsch & HilleRisLambers PLOS ONE geonames
Temporal course of gene expression during motor memory formation in primary motor cortex of rats 2016 Hertler et al. Neurobiology of Learning and Memory plotly
A study of institutional spending on open access publication fees in Germany 2016 Jahn & Tullney PeerJ rcrossref
Evolutionary dynamics and biogeography of Musaceae reveal a correlation between the diversification of the banana family and the geological and climatic history of Southeast Asia 2016 Janssens et al. New Phytol rgbif
Using the Crossref Metadata API to explore publisher content 2016 Lammey Sci Ed rcrossref, ropensci
Positive biodiversity-productivity relationship predominant in global forests 2016 Liang et al. Science taxize
The Propensity to Cycle Tool: An open source online system for sustainable transport planning 2015 Lovelace et al. arXiv stplanr
Knowledge Dissemination of Intimate Partner Violence Intervention Studies Measured Using Alternative Metrics Results From a Scoping Review 2016 Madden et al. Journal of Interpersonal Violence rAltmetric
Analysis of infection biomarkers within a Bayesian framework reveals their role in pneumococcal pneumonia diagnosis in HIV patients 2016 Meyer Cold Spring Harbor Laboratory plotly
rotl: an R package to interact with the Open Tree of Life data 2016 Michonneau et al. Methods in Ecology and Evolution rotl, traits
Growth rings in tropical trees: role of functional traits, environment, and phylogeny 2016 Nath et al. Trees taxize
Open Source Molecular Modeling 2016 Pirhadi et al. Journal of Molecular Graphics and Modelling webchem
Adaptive evolution of seed oil content in angiosperms: accounting for the global patterns of seed oils 2016 Sanyal & Decocq BMC Evolutionary Biology rgbif
Genome size variation and species diversity in salamander families 2016 Sclavi & Herrick Cold Spring Harbor Laboratory taxize
Ciência Política na era do Big Data: automação na coleta de dados digitais 2015 Silva & Meireles Politica Hoje RSelenium
Waking the undead: implications of a soft explosive model for the timing of placental mammal diversification 2016 Springer et al. Molecular Phylogenetics and Evolution paleobioDB
CARMA revisited: an updated database of carbon dioxide emissions from power plants worldwide 2012 Ummel Center for Global Development Working Paper geonames
Light enough to travel or wise enough to stay? Brain size evolution and migratory behaviour in birds 2016 Vincze Evolution taxize
A review of software tools for spell-checking taxon names in vegetation databases 2016 Wagner Journal of Vegetation Science taxize
tigris: An R Package to Access and Work with Geographic Data from the US Census Bureau in press Walker The R Journal plotly
Foliar nectar enhances plant–mite mutualisms: the effect of leaf sugar on the control of powdery mildew by domatia-inhabiting mites 2016 Weber et al. Annals of Botany taxize
Achievements and challenges in the integration, reuse and synthesis of vegetation plot data 2016 Wiser Journal of Vegetation Science taxize
BETYdb: a yield, trait, and ecosystem service database applied to second‐generation bioenergy feedstock production 2017 LeBauer et al. GCB Bioenergy traits
RAINBIO: a mega-database of tropical African vascular plants distributions 2016 Gilles et al. PhytoKeys rgbif
Despite phylogenetic effects, C3-C4 lineages bridge the ecological gap to C4 photosynthesis 2016 Lundgren & Christin Journal of Experimental Botany rgbif
Comparing genome versus proteome-based identification of clinical bacterial isolates 2016 Galata et al. Briefings in Bioinformatics taxize
Phenological shifts in hoverflies (Diptera: Syrphidae): linking measurement and mechanism 2016 Hassall et al. Ecography bold
The Tao of open science for ecology 2015 Hampton et al. Ecosphere rentrez
Integrative Computational and Experimental Approaches to Establish a Post-Myocardial Infarction Knowledge Map 2014 Nguyen et al. PLoS Computational Biology rentrez
Do method and species lifestyle affect measures of maximum metabolic rate in fishes? 2016 Killen et al. Journal of Fish Biology rotl
Species interactions in occurrence data for a community of tick-transmitted pathogens 2016 Estrada-Peña & Fuente Scientific Data rotl
The Quality of Citations: Towards Quantifying Qualitative Impact in Social Science Research 2016 Bauer et al. SSRN fulltext, rcrossref
Environmental Correlation Analysis for Genes Associated with Protection against Malaria 2016 Mackinnon et al. Molecular Biology and Evolution rsnps
Visualizing GeoData with R 2016 Kolb Austrian Journal of Statistics geonames
CARMA Revisited: An Updated Database of Carbon Dioxide Emissions from Power Plants Worldwide 2012 Ummel CGD Working Paper geonames
Elevation alters ecosystem properties across temperate treelines globally 2017 Mayor et al. Nature brranching
BIOMASS: An R Package for estimating aboveground biomass and its uncertainty in tropical forests 2017 Réjou-Méchain et al. Methods in Ecology and Evolution taxize
Modelling the effects of environmental conditions on the acoustic occurrence and behaviour of Antarctic blue whales 2017 Shabangu et al. PLOS ONE rerddap
Fish diversity in tidepools: assembling effects of environmental heterogeneity 2017 Bezerra et al. Environmental Biology of Fishes rfishbase
Spatial distribution of environmental DNA in a nearshore marine habitat 2017 O’Donnell et al. PeerJ taxize
Shotgun metagenomic sequencing reveals freshwater beach sands as reservoir of bacterial pathogens 2017 Mohiuddin et al. Water Research taxize
Single locus genotyping to track Leishmania donovani in the Indian subcontinent: Application in Nepal 2017 Rai et al. PLOS Neglected Tropical Diseases rgbif
Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding 2017 Andruszkiewicz et al. PLOS ONE taxize
Adaptive sequence evolution is driven by biotic stress in a pair of orchid species (Dactylorhiza) with distinct ecological optima 2017 Balao et al. Molecular Ecology rgbif
red - an R package to facilitate species red list assessments according to the IUCN criteria 2017 Cardoso Biodiversity Data Journal rredlist
Habitat filtering not dispersal limitation shapes oceanic island floras: species assembly of the Galápagos archipelago 2017 Carvajal-Endara et al. Ecology Letters rgbif
Ex situ conservation of plant diversity in the world’s botanic gardens 2017 Mounce et al. Nature Plants rgbif
Challenging a bioinformatic tool’s ability to detect microbial contaminants using in silico whole genome sequencing data 2017 Olson et al. PeerJ taxize
The role of trait combination in the conspicuousness of fruit display among bird-dispersed plants 2017 Ordano et al. Functional Ecology taxize
Aligning marine species range data to better serve science and conservation 2017 O’Hara et al. PLOS ONE worrms
The National Eutrophication Survey: lake characteristics and historical nutrient concentrations 2017 Stachelek et al. Earth System Science Data Discussions magick, tesseract
A global database on freshwater fish species occurrence in drainage basins 2017 Tedesco et al. Scientific Data rfishbase
Genome size in arthropods: different roles of phylogeny, habitat and life history in insects and crustaceans 2017 Alfsnes et al. Ecology and Evolution rgbif, spocc
On the inconsistency of pollinator species traits for predicting either response to land-use change or functional contribution 2017 Bartomeus et al. Oikos taxize
On the inconsistency of pollinator species traits for predicting either response to agricultural intensification or functional contribution 2016 Bartomeus et al. Cold Spring Harbor Laboratory taxize
R Python, and Ruby clients for GBIF species occurrence data 2017 Chamberlain & Boettiger PeerJ Preprints rgbif
The Spine of American Law: Digital Text Analysis and US Legal Practice 2017 Funk & Mullen The American Historical Review textreuse
Assessing author self-citation as a mechanism of relevant knowledge diffusion 2017 Gálvez Scientometrics rplos
bomrang: Fetch Australian Government Bureau of Meteorology Data in R 2017 Sparks et al. The Journal of Open Source Software bomrang
Using the 'rentrez' R Package to Identify Repository Records for NCBI LinkOut 1279 Lee et al. Code4lib Journal rentrez, ropensci
A quantitative-PCR based method to estimate ranavirus viral load following normalisation by reference to an ultraconserved vertebrate target 2017 Leung et al. Journal of Virological Methods taxize
A quantitative and statistical biological comparison of three semi-enclosed seas 2017 Ludt et al. Marine Biodiversity rgbif
Taxonomic bias in animal behaviour publications 2017 Rosenthal et al. Animal Behaviour taxize
Content Analysis of Scholarly Discussions of Psychological Academic Articles on Facebook 2017 Na & Ye Online Information Review rAltmetric
Genome-Scale Architecture of Small Molecule Regulatory Networks and the Fundamental Trade-Off between Regulation and Enzymatic Activity 2017 Reznik et al. Cell Reports taxize
Tracking Invasive Alien Species (TrIAS): Building a data-driven framework to inform policy 2017 Vanderhoeven et al. Research Ideas and Outcomes rgbif, spocc
A distribution and taxonomic reference dataset of Geranium in the New World 2017 Aedo & Pando Scientific Data rgbif
Amazon plant diversity revealed by a taxonomically verified species list 2017 Cardoso et al. Proceedings of the National Academy of Sciences rgbif
Barriers to globally invasive species are weakening across the Antarctic 2017 Duffy et al. Diversity and Distributions rgbif
Trait shifts associated with the subshrub life-history strategy in a tropical savanna 2017 Giroldo et al. Oecologia brranching
How is R cited in research outputs? Structure, impacts, and citation standard 2017 Li et al. Journal of Informetrics rplos
Environmental correlates of biome-level floristic turnover in South Africa 2017 Power et al. Journal of Biogeography taxize
Quantifying the influence of urban land use on mangrove biology and ecology: A meta-analysis 2017 Branoff Global Ecology and Biogeography taxize
The Future Species of Anthropocene Seas 2017 Dulvy & Kindsvater Conservation for the Anthropocene Ocean rfishbase
Multilocus phylogeny and statistical biogeography clarify the evolutionary history of major lineages of turtles 2017 Pereira et al. Molecular Phylogenetics and Evolution rgbif
A new species of Telipogon (Oncidiinae: Orchidaceae) from the paramos of Colombia 2017 Pérez-Escobar et al. Phytotaxa spocc
Testing the association of phenotypes with polyploidy: An example using herbaceous and woody eudicots 2017 Zenil-Ferguson et al. Evolution chromer
GSODR: Global Summary Daily Weather Data in R 2017 Sparks et al. The Journal of Open Source Software GSODR
Signatures of the collapse and incipient recovery of an overexploited marine ecosystem 2017 Pedersen et al. Royal Society Open Science rfishbase
Evaluating two freely available geocoding tools for geographical inconsistencies and geocoding errors 2017 Singh Open Geospatial Data, Software and Standards helminthR
rentrez: An R package for the NCBI eUtils API (Version 1 2017 Winter PeerJ Preprints rentrez
Distribution and diversity of enzymes for polysaccharide degradation in fungi 2017 Berlemont Scientific Reports taxize
Species are not most abundant in the centre of their geographic range or climatic niche 2017 Dallas et al. Ecology Letters spocc, taxize
Cophylogenetic signal is detectable in pollination interactions across ecological scales 2017 Hutchinson et al. Ecology taxize
Pathogenic helminths in the past: Much ado about nothing 2017 Mulder F1000Research helminthR
Integrating lipid storage into general representations of fish energetics 2017 Martin et al. Journal of Animal Ecology rfishbase
Naturalization of ornamental plant species in public green spaces and private gardens 2017 Mayer et al. Biological Invasions rgbif
Skull shape reflects prey size niche in toothed whales 2017 McCurry et al. Biological Journal of the Linnean Society rfishbase
Geographical variation in the foraging behaviour of the pantropical red-footed booby 2017 Mendez et al. Marine Ecology Progress Series rerddap
Species pool distributions along functional trade-offs shape plant productivity–diversity relationships 2017 Chalmandrier et al. Scientific Reports rgbif, taxize
Repetitive prefix in Agul: Morphological copy from a closely related language 2017 Maisak International Journal of Bilingualism lingtypology
Cophylogenetic assessment of New World warblers (Parulidae) and their symbiotic feather mites (Proctophyllodidae 2017 Matthews et al. Journal of Avian Biology rotl
High dimensional Single Index Bayesian Modeling of the Brain Atrophy over time 2017 Roy et al. arXiv rsnps
2017 Drost et al. Bioinformatics biomartr, taxize
Tree seedling vitality improves with functional diversity in a Mediterranean common garden experiment 2018 Peer et al. Forest Ecology and Management brranching
tidyhydat: Extract and Tidy Canadian Hydrometric Data 2017 Albers The Journal of Open Source Software tidyhydat
Varieties of Melampyrum Lineare (Orobanchaceae) Revisited 2017 Oldham & Weeks Rhodora spocc
PlasFlow: predicting plasmid sequences in metagenomic data using genome signatures 2018 Krawczyk et al. Nucleic Acids Research rentrez
Performance evaluation of mathematical predictive modeling for air quality forecasting 2018 Selvi & Chandrasekaran Cluster Computing ropenaq
Big data of tree species distributions: how big and how good? 2017 Serra-Diaz et al. Forest Ecosystems rgbif
Work Engagement among Rescue Workers: Psychometric Properties of the Portuguese UWES 2018 Sinval et al. Frontiers in Psychology skimr
Most species are not limited by an Amazonian river postulated to be a border between endemism areas 2018 Santorelli et al. Scientific Reports rotl
Seed-dispersal interactions in fragmented landscapes - a metanetwork approach 2018 Emer et al. Ecology Letters taxize
Patterns of microsatellite distribution reflect the evolution of biological complexity 2018 Surabhi et al. Cold Spring Harbor Laboratory taxize
Transcriptome profiling of lentil (Lens culinaris) through the first 24 hours of Ascochyta lentis infection reveals key defence response genes 2018 Khorramdelazad et al. BMC Genomics taxize
The differential impact of scientific quality, bibliometric factors, and social media activity on the influence of systematic reviews and meta-analyses about psoriasis 2018 Ruano et al. PLOS ONE rAltmetric
A transcript-wide association study in physical activity intervention implicates molecular pathways in chronic disease 2018 Claypool & Patel Cold Spring Harbor Laboratory rentrez
Modelling air pollution, climate and health data using Bayesian Networks: a case study of the English regions 2018 Vitolo et al. Earth and Space Science rdefra
Scraping Financial Data from the Web Using R Language 2018 Krotov & Tennyson Journal of Emerging Technologies in Accounting pdftools
SecretSanta: flexible pipelines for functional secretome prediction 2018 Gogleva et al. Bioinformatics biomartr
miRToolsGallery: a tag-based and rankable microRNA bioinformatics resources database portal 2018 Chen et al. Database rentrez
Link prediction for interdisciplinary collaboration via co-authorship network 2018 Cho & Yu arXiv rcrossref
Do traditional scientometric indicators predict social media activity on scientific knowledge? An analysis of the ecological literature 2018 Nabout et al. Scientometrics rAltmetric
Intraspecific and interspecific adaptive latitudinal cline in Brassicaceae seed oil traits 2018 Sanyal et al. American Journal of Botany rgbif
BioDataome: a collection of uniformly preprocessed and automatically annotated datasets for data-driven biology 2018 Lakiotaki et al. Database rentrez
New formula and conversion factor to compute tree species basic wood density from a global wood technology database 2018 Vieilledent et al. Cold Spring Harbor Laboratory taxize
Taxa: An R package implementing data standards and methods for taxonomic data 2018 Foster et al. F1000Research taxa, taxize
A meta-analysis of birth-origin effects on reproduction in diverse captive environments 2018 Farquharson et al. Nature Communications rotl
Filter-dispersal assembly of lowland Neotropical rainforests across the Andes 2018 Bemmels et al. Ecography rgbif, brranching
Systematic Functional Annotation of Somatic Mutations in Cancer 2018 Ng et al. Cancer Cell biomartr
GlobTherm, a global database on thermal tolerances for aquatic and terrestrial organisms 2018 Bennett et al. Scientific Data taxize
Nomenclature instability in species culturomic assessments: Why synonyms matter 2018 Correia et al. Ecological Indicators taxize
GeneXX: An online tool for the exploration of transcript changes in skeletal muscle associated with exercise 2018 Reibe et al. Physiological Genomics rentrez
Brazil-Portugal Transcultural Adaptation of the UWES-9: Internal Consistency, Dimensionality, and Measurement Invariance 2018 Sinval et al. Frontiers in Psychology skimr
Development of quantitative screen for 1550 chemicals with GC-MS 2018 Bergmann et al. Analytical and Bioanalytical Chemistry webchem
ijtiff: An R package providing TIFF I/O for ImageJ users 2018 Nolan & Padilla-Parra Journal of Open Source Software ijtiff
MicroRNA&ndash,mRNA expression profiles associated with medulloblastoma subgroup 4 2018 Gershanov et al. Cancer Management and Research iheatmapr
Zenodo in the Spotlight of Traditional and New Metrics 2017 Peters et al. Frontiers in Research Metrics and Analytics oai
visdat: Visualising Whole Data Frames 2017 Tierney The Journal of Open Source Software visdat
Fast, Consistent Tokenization of Natural Language Text 2018 Mullen et al. Journal of Open Source Software tokenizers, textreuse
Niche conservatism and the invasive potential of the wild boar 2017 Sales et al. Journal of Animal Ecology spocc
Multivariate skeletal analyses support a taxonomic distinction between New Zealand and Australian Eudyptula penguins (Sphenisciformes: Spheniscidae 2017 Grosser et al. Emu - Austral Ornithology rnoaa
Arthropod and oligochaete assemblages from grasslands of the southern Kenai Peninsula, Alaska 2017 Bowser et al. Biodiversity Data Journal bold
Disparities in second-generation DNA metabarcoding results exposed with accessible and repeatable workflows 2018 Divoll et al. Molecular Ecology Resources bold
Illuminating prey selection in an insectivorous bat community exposed to artificial light at night 2017 Cravens et al. Journal of Applied Ecology bold
Missing the point: are journals using the ideal number of decimal places? 2018 Barnett F1000Research rentrez
Natural history bycatch: a pipeline for identifying metagenomic sequences in RADseq data 2018 Holmes & Davis Rabosky PeerJ taxize
Quantitative Falsification for Qualitative Findings 2018 Pajo Social Science Computer Review tokenizers
Genomic and transcriptomic alterations in Leishmania donovani lines experimentally resistant to antileishmanial drugs 2018 Rastrojo et al. International Journal for Parasitology plotly
Down-sizing of dung beetle assemblages over the last 53 000 years is consistent with a dominant effect of megafauna losses 2018 Schweiger & Svenning Oikos rgbif
Miniaturisation of biologgers is not alleviating the 5% rule 2018 Portugal & White Methods in Ecology and Evolution rotl
Comparative transcriptomics and genomic patterns of discordance in Capsiceae (Solanaceae 2018 Spalink et al. Molecular Phylogenetics and Evolution rentrez
Seasonal dynamics of typhoid and paratyphoid fever 2018 Saad et al. Scientific Reports rgbif
miRCancerdb: a database for correlation analysis between microRNA and gene expression in cancer 2018 Ahmed et al. BMC Research Notes cRegulome
Data sharing in PLOS ONE: An analysis of Data Availability Statements 2018 Federer et al. PLOS ONE rplos
Effects of nettle slurry (Urtica dioica L 2018 Garmendia et al. PeerJ writexl
Drivers and rates of stock assessments in the United States 2018 Neubauer et al. PLOS ONE rfishbase
A snapshot of translational research funded by the National Institutes of Health (NIH): A case study using behavioral and social science research awards and Clinical and Translational Science Awards funded publications 2018 Han et al. PLOS ONE rentrez
Fish reproductive-energy output increases disproportionately with body size 2018 Barneche et al. Science rotl
Wearable camera-derived microenvironments in relation to personal exposure to PM 2.5 2018 Salmon et al. Environment International rtimicropem
Suppdata: Downloading Supplementary Data from Published Manuscripts 2018 Pearse et al. Journal of Open Source Software suppdata
autoplotly: An R package for automatic generation of interactive visualizations for statistical results 2018 Tang Journal of Open Source Software plotly
Refining area of occupancy to address the modifiable areal unit problem in ecology and conservation. Conservation Biology 2018 Moat et al. Conservation Biology rredlist
One thousand DNA barcodes of piranhas and pacus reveal geographic structure and unrecognised diversity in the Amazon 2018 Machado et al. Scientific Reports rentrez
Genomic and transcriptomic alterations in Leishmania donovani lines experimentally resistant to antileishmanial drugs 2018 Rastrojo et al. International Journal for Parasitology: Drugs and Drug Resistance plotly
Genomic atlas of the human plasma proteome 2018 Sun et al. Nature rentrez, plotly
snpEnrichR: analyzing co-localization of SNPs and their proxies in genomic regions 2018 Nousiainen et al. Bioinformatics RSelenium
Machine learning techniques for the automation of literature reviews and systematic reviews in EFSA 2018 Jaspers et al. EFSA Supporting Publications aRxiv, rbhl, rcrossref, rdatacite, rplos
Linking Traditional Chinese Medicinal Herbs to Cancer Related Pathways 2018 Hsu Scholar Archive plotly
Characteristics of the bacterial microbiome in association with common intestinal parasites in irritable bowel syndrome 2018 Krogsgaard et al. Clinical and Translational Gastroenterology plotly
Global drivers of reef fish growth 2018 Morais & Bellwood Fish and Fisheries rotl
A stromal cell population that inhibits adipogenesis in mammalian fat depots 2018 Schwalie et al. Nature biomartr
Nature’s untold stories: an overview on the availability and type of on-line data on long-term biodiversity monitoring 2018 Ondei et al. Biodiversity and Conservation taxize
2018 Sanford et al. Sexual Medicine plotly
Instances of erroneous DNA barcoding of metazoan invertebrates: Are universal cox1 gene primers too “universal”? 2018 Mioduchowska et al. PLOS ONE rentrez
Text Analytics Techniques in the Digital World: a Sentiment Analysis Case Study of the Coverage of Climate Change on US News Networks 2018 Casey Irish Communication Review tokenizers
Specalyzer—an interactive online tool to analyze spectral reflectance measurements 2018 Koc et al. PeerJ plotly
WHAM!: a web-based visualization suite for user-defined analysis of metagenomic shotgun sequencing data 2018 Devlin et al. BMC Genomics plotly
Distributional Patterns and Ecological Determinants of Bat Occurrence Inside Caves: A Broad Scale Meta-Analysis 2018 De Oliveira et al. Diversity rgbif
Abstract 4643: Drug-Target Explorer: An interactive tool for examining chemical-biological interactions 2018 Allaway et al. Cancer Chemistry webchem
Restoration Provides Hope for Faunal Recovery: Changes in Primate Abundance Over 45 Years in Kibale National Park, Uganda 2018 Chapman et al. Tropical Conservation Science rnaturalearth
Optimizing community trees using the open tree of life increases the reliability of phylogenetic diversity and dispersion indices 2018 Gastauer et al. Ecological Informatics rotl, brranching
Research on Research: A Meta-Scientific Study of Problems and Solutions in Psychological Science 2018 Nuijten Center for Open Science rplos
Distribution and ecological segregation on regional and microgeographic scales of the diploid Centaurea aspera L., the tetraploid C. seridis L., and their triploid hybrids (Compositae 2018 Garmendia et al. PeerJ writexl
The altmetric performance of publications authored by Brazilian researchers: analysis of CNPq productivity scholarship holders 2018 Araujo & Alves arXiv rAltmetric
Characterization of the accessible genome in the human malaria parasite Plasmodium falciparum 2018 Ruiz et al. Nucleic Acids Research iheatmapr
Allometric and trait-based patterns in parasite stoichiometry 2018 Paseka & Grunberg Oikos rotl
DataPackageR: Reproducible data preprocessing, standardization and sharing using R/Bioconductor for collaborative data analysis 2018 Finak et al. Gates Open Research DataPackageR
Vulnerability to snakebite envenoming: a global mapping of hotspots 2018 Longbottom et al. The Lancet spocc
Complex analyses of short inverted repeats in all sequenced chloroplast DNAs 2018 Brázda et al. BioMed Research International plotly
Epidemiological significance of dengue virus genetic variation in mosquito infection dynamics 2018 Fontaine et al. PLOS Pathogens plotly
Spatially explicit action research for coastal fisheries management 2018 Lawrence & Bhalla PLOS ONE plotly
Diverse lignocellulosic feedstocks can achieve high field-scale ethanol yields while providing flexibility for the biorefinery and landscape-level environmental benefits 2018 Zhang et al. GCB Bioenergy plotly
Mining human cancer datasets for kallikrein expression in cancer: the “KLK-CANMAP” Shiny web tool 2018 Wang et al. Biological Chemistry plotly
Evolutionary dynamics of host specialization in wood-decay fungi 2018 Krah et al. BMC Evolutionary Biology rusda
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A global assessment of tourism and recreation conservation threats to prioritise interventions 2018 Lusseau & Mancini arXiv rredlist, rgbif
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Maternal Testosterone and Offspring Sex-Ratio in Birds and Mammals: A Meta-Analysis 2017 Merkling et al. Evolutionary Biology rotl
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Predicting the time needed for environmental systematic reviews and systematic maps 2018 Haddaway & Westgate Conservation Biology plotly
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Spatiotemporal dynamics and risk factors for human Leptospirosis in Brazil 2018 Baquero & Machado Scientific Reports tabulizer
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New formula and conversion factor to compute basic wood density of tree species using a global wood technology database 2018 Vieilledent et al. American Journal of Botany taxize
Changing station coverage impacts temperature trends in the Upper Colorado River Basin 2018 McAfee et al. International Journal of Climatology FedData
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Temporal and geographic distribution of weather conditions favorable to airborne spread of foot-and-mouth disease in the coterminous United States 2018 Hagerman et al. Preventive Veterinary Medicine riem
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Persistence of environmental DNA in marine systems 2018 Collins et al. Communications Biology rgbif, rentrez
Imaging natural history museum collections from the bottom up: 3D print technology facilitates imaging of fluid-stored arthropods with flatbed scanners 2018 Mendez et al. ZooKeys magick
The evolution of language families is shaped by the environment beyond neutral drift 2018 Bentz et al. Nature Human Behaviour rgbif
Mapping knowledge gaps in marine diversity reveals a latitudinal gradient of missing species richness 2018 Menegotto & Rangel Nature Communications rgbif
Insecticide resistance in Anopheles gambiae from the northern Democratic Republic of Congo, with extreme knockdown resistance (kdr) mutation frequencies revealed by a new diagnostic assay 2018 Lynd et al. Malaria Journal plotly
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A Remote Sensing Approach for Regional-Scale Mapping of Agricultural Land-Use Systems Based on NDVI Time Series 2017 Bellón et al. Remote Sensing MODIStsp
Climatic fluctuations and malaria transmission dynamics, prior to elimination, in Guna Yala, República de Panamá 2018 Hurtado et al. Malaria Journal MODIStsp
Assessment of Water Management Changes in the Italian Rice Paddies from 2000 to 2016 Using Satellite Data: A Contribution to Agro-Ecological Studies 2018 Ranghetti et al. Remote Sensing MODIStsp
Improved regional-scale Brazilian cropping systems’ mapping based on a semi-automatic object-based clustering approach 2018 Bellón et al. International Journal of Applied Earth Observation and Geoinformation MODIStsp
Estimating inter-annual variability in winter wheat sowing dates from satellite time series in Camargue, France 2017 Manfron et al. International Journal of Applied Earth Observation and Geoinformation MODIStsp
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Conceptual Architecture and Service-Oriented Implementation of a Regional Geoportal for Rice Monitoring 2017 Granell et al. ISPRS International Journal of Geo-Information MODIStsp
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Conducting social network analysis with animal telemetry data: applications and methods using spatsoc 2018 Robitaille et al. Cold Spring Harbor Laboratory spatsoc
Relation of El Niño and La Niña phenomena to precipitation, evapotranspiration and temperature in the Amazon basin 2019 Moura et al. Science of The Total Environment MODIStsp
Historical collections as a tool for assessing the global pollination crisis 2018 Bartomeus et al. Philosophical Transactions of the Royal Society B: Biological Sciences taxize, rgbif
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Physiological and pathophysiological characteristics of ataxin-3 isoforms 2018 Weishäupl et al. Journal of Biological Chemistry magick
Botanic gardens are an untapped resource for studying the functional ecology of tropical plants 2018 Perez et al. Philosophical Transactions of the Royal Society B: Biological Sciences spocc
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Managing Larger Data on a GitHub Repository 2018 Boettiger Journal of Open Source Software piggyback
rcites: An R package to access the CITES Speciesplus database 2018 Geschke et al. Journal of Open Source Software rcites
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Accumulation processes of trace metals into Arctic sea ice: distribution of Fe, Mn and Cd associated with ice structure 2018 Evans & Nishioka Marine Chemistry magick
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Assessing the Conservation Potential of Fish and Corals in Aquariums Globally 2018 Da Silva et al. Journal for Nature Conservation taxize
Impacts of landscape composition, marginality of distribution, soil fertility, and climatic stability on the patterns of woody plant endemism in the Cerrado 2018 Vidal et al. Cold Spring Harbor Laboratory rgbif
Multifocal Versus Conventional Unifocal Diverticulitis: A Comparison of Clinical and Transcriptomic Characteristics 2018 Kline et al. Digestive Diseases and Sciences plotly
Improving consumption based accounting for global capture fisheries 2018 West et al. Journal of Cleaner Production rfishbase
4-Fluoramphetamine in the Netherlands: Text-mining and sentiment analysis of internet forums 2019 Blankers et al. International Journal of Drug Policy RSelenium
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GeneHummus: A pipeline to define gene families and their expression in legumes and beyond 2018 Die et al. Cold Spring Harbor Laboratory rentrez
Construction and evaluation of a robust trophic network model for the northern Gulf of Mexico ecosystem 2019 Leaf & Oshima Ecological Informatics rfishbase
Litter decomposition driven by soil fauna, plant diversity and soil management in urban gardens 2018 Tresch et al. Science of The Total Environment rotl
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pavo 2: new tools for the spectral and spatial analysis of colour in R 2018 Maia et al. Cold Spring Harbor Laboratory magick
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Bridging Theory and Practice Through Modular Graphical User Interfaces 2018 Rehbach et al. Journal of Multimedia Processing and Technologies plotly
A survey of digitized data from U.S. fish collections in the iDigBio data aggregator 2018 Singer et al. PLOS ONE plotly
Dosage Compensation of the X Chromosomes in Bovine Germline Early Embryos and Somatic Tissues 2018 Duan et al. Genome Biology and Evolution plotly
Data on the conservation potential of fish and coral populations in aquariums 2018 Da Silva & Conde Data in Brief taxize
Genome size variation and species diversity in salamanders 2018 Sclavi & Herrick Journal of Evolutionary Biology taxize
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Agricultural landscape generators for simulation models: A review of existing solutions and an outline of future directions 2019 Langhammer et al. Ecological Modelling landscapetools, NLMR
The politeness Package: Detecting Politeness in Natural Language 2018 Yeomans et al. The R Journal hunspell
Phylogeography, population genetics, and distribution modeling reveal vulnerability of Scirpus longii (Cyperaceae) and the Atlantic Coastal Plain Flora to climate change 2019 Spalink et al. Molecular Ecology rgbif
A Curated, Comprehensive Database of Plasmid Sequences 2019 Brooks et al. Microbiology Resource Announcements rentrez
A joint text mining-rank size investigation of the rhetoric structures of the US Presidents’ speeches 2019 Ficcadenti et al. Expert Systems with Applications tokenizers
A synthesis of animal-mediated seed dispersal of palms reveals distinct biogeographical differences in species interactions 2019 Muñoz et al. Journal of Biogeography taxize
The unknown followers: Discovery of a new species of Sycobia Walker (Hymenoptera: Epichrysomallinae) associated with Ficus benjamina L (Moraceae) in the Neotropical region 2018 Farache et al. Journal of Hymenoptera Research rnaturalearth
A Systematic Review of Open Source Clinical Software on GitHub for Improving Software Reuse in Smart Healthcare 2019 Shen & Spruit Applied Sciences plotly
masstodon: A tool for assigning peaks and modeling electron transfer reactions in top-down mass spectrometry 2019 Łącki et al. Analytical Chemistry plotly
Linking life-history theory and metabolic theory explains the offspring size-temperature relationship 2019 Pettersen et al. Ecology Letters rotl
Small is big in Arabidopsis mitochondrial ribosome 2019 Waltz et al. Nature Plants plotly
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Evolutionary pathways toward gigantism in sharks and rays 2019 Pimiento et al. Evolution rfishbase
Terrestrial locomotion energy costs vary considerably between species: no evidence that this is explained by rate of leg force production or ecology 2019 Halsey & White Scientific Reports rotl
Investigating the association between mating-relevant self-concepts and mate preferences through a data-driven analysis of online personal descriptions 2019 Lee et al. Center for Open Science RSelenium, hunspell
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Introducing of modeling techniques in the research of POPs in breast milk – A pilot study 2019 Jovanović et al. Ecotoxicology and Environmental Safety plotly
Agroforestry is paying off – Economic evaluation of ecosystem services in European landscapes with and without agroforestry systems 2019 Kay et al. Ecosystem Services plotly
Improving the detection of wildfire disturbances in space and time based on indicators extracted from MODIS data: a case study in northern Portugal 2019 Marcos et al. International Journal of Applied Earth Observation and Geoinformation MODIStsp
HABIT - a webserver for interactive T cell neoepitope discovery 2019 Martins et al. Cold Spring Harbor Laboratory plotly
Sensitive high-throughput single-cell RNA-seq reveals within-clonal transcript correlations in yeast populations 2019 Nadal-Ribelles et al. Nature Microbiology plotly
Malaria infection rates in Anopheles albimanus (Diptera: Culicidae) at Ipetí-Guna, a village within a region targeted for malaria elimination in Panamá 2019 Rigg et al. Infection, Genetics and Evolution MODIStsp
SpNetPrep: An R package using Shiny to facilitate spatial statistics on road networks 2019 Briz-Redón Research Ideas and Outcomes osmdata
Serotonin levels and 1-year mortality in patients with neuroendocrine tumors: a systematic review and meta-analysis 2019 Joish et al. Future Oncology plotly
Evidence of a trans-kingdom plant disease complex between a fungus and plant-parasitic nematodes 2019 Wheeler et al. PLOS ONE plotly
Does the Asset Pricing Premium Reflect Asymmetric or IncompleteInformation? 2018 Liu et al. Economics Faculty Working Papers Series hunspell
Modelling Influential Factors of Consumption in Buildings Connected to District Heating Systems 2019 Maljkovic Energies packagemetrics
A season for all things: Phenological imprints in Wikipedia usage and their relevance toconservation 2019 Mittermeier & NA PLoS Biology rgbif, rebird
Trends and perspectives on the use of animal social network analysis in behavioural ecology: a bibliometric approach 2019 Webber & Vander Wal Animal Behaviour spatsoc
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Deep brain stimulation of the subthalamic nucleus and the temporal discounting of primary and secondary rewards 2019 Aiello et al. Journal of Neurology plotly
Phylogenetic investigation of skin sloughing rates in frogs: relationships with skin characteristics and disease-driven declines 2019 Ohmer et al. Proceedings of the Royal Society B: Biological Sciences rotl
Patterns of microsatellite distribution across eukaryotic genomes 2019 Srivastava et al. BMC Genomics taxize
A benchmark dataset of herbarium specimen images with label data 2019 Dillen et al. Biodiversity Data Journal rgbif
Identifying historic river ice breakup timing using MODIS and Google Earth Engine in support of operational flood monitoring in Northern Ontario 2019 Beaton et al. Remote Sensing of Environment tidyhydat
Environmental DNA metabarcoding of wild flowers reveals diverse communities of terrestrial arthropods 2019 Thomsen & Sigsgaard Ecology and Evolution taxize
Contemporary climatic analogs for 540 North American urban areas in the late 21st century 2019 Fitzpatrick & Dunn Nature Communications rnoaa
An epilimnion and hypolimnion temperature model based on air temperature and lake characteristics 2019 Prats & Danis Knowledge & Management of Aquatic Ecosystems tabulizer
Land-Cover Pattern and Change 2018 Fletcher & Fortin Spatial Ecology and Conservation Modeling NLMR
Postglacial vegetation, fire, and climate history along the eastern Andes, Argentina and Chile (lat. 41–55°S 2019 Nanavati et al. Quaternary Science Reviews neotoma
Why tree lines are lower on islands-Climatic and biogeographic effects hold the answer 2019 Karger et al. Global Ecology and Biogeography CoordinateCleaner
The Prevalence of Marginally Significant Results in Psychology Over Time 2019 Olsson-Collentine et al. Psychological Science rcrossref
Taxonomic and geographic bias in the genetic study of helminth parasites 2019 Poulin et al. International Journal for Parasitology rentrez
A time travel story: metagenomic analyses decipher the unknown geographical shift and the storage history of possibly smuggled antique marble statues 2019 Piñar et al. Annals of Microbiology rgbif
Ligustrum lucidum W. T. Aiton (broad-leaf privet) demonstrates climatic niche shifts during global-scale invasion 2019 Dreyer et al. Scientific Reports rgbif
Genomic, ecological, and morphological approaches to investigating species limits: A case study in modern taxonomy from Tropical Eastern Pacific surgeonfishes 2019 Ludt et al. Ecology and Evolution rgbif
Impacts of historical warming on marine fisheries production 2019 Free et al. Science rfishbase
Bat Research Networks and Viral Surveillance: Gaps and Opportunities in Western Asia 2019 Phelps et al. Viruses rentrez
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Biodiversity data integration--The significance of data resolution and domain 2019 König et al. PLOS Biology taxize
SV-Pop: population-based structural variant analysis and visualization 2019 Ravenhall et al. BMC Bioinformatics plotly
Mapping and understanding the digital biodiversity knowledge about vertebrates in the Atlantic Rainforest 2019 Higino & Vital Center for Open Science taxize
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Does evolutionary history determine specificity in broad ecological interactions? 2019 Shefferson et al. Journal of Ecology rotl
Bcor loss perturbs myeloid differentiation and promotes leukaemogenesis 2019 Kelly et al. Nature Communications plotly
A machine learning framework for automated analysis of central bank communication and media discourse. The case of Narodowy Bank Polski 2019 Rybinski Bank & Credit RSelenium
All by myself? Meta‐analysis of animal contests shows stronger support for self than for mutual assessment models 2019 Pinto et al. Biological Reviews rotl
Modelling Function-Valued Processes with Nonseparable Covariance Structure 2019 Konzen et al. arXiv weathercan
Detection of Vegetation Cover Change in Renewable Energy Development Zones of Southern California Using MODIS NDVI Time Series Analysis, 2000 to 2018 2019 Nghiem et al. Environments MODIStsp
KLRfome - Kernel Logistic Regression on Focal Mean Embeddings 2019 Harris Journal of Open Source Software NLMR
Improving the detection of wildfire disturbances in space and time based on indicators extracted from MODIS data: a case study in northern Portugal 2019 Marcos et al. International Journal of Applied Earth Observation and Geoinformation MODIStsp
Global buffering of temperatures under forest canopies 2019 De Frenne et al. Nature Ecology & Evolution CoordinateCleaner
The Two-Way Street of Open Access Journal Publishing 2019 Matthias et al. Flip It and Reverse It. Publications rcrossref
The role of the environment in the evolution of nest shape in Australian passerines 2019 Medina Scientific Reports rgbif
An unbiased in vitro screen for activating epidermal growth factor receptor mutations 2019 Chakroborty et al. Journal of Biological Chemistry plotly
An efficient and robust laboratory workflow and tetrapod database for larger scale environmental DNA studies 2019 Axtner et al. GigaScience taxize
Bats in a changing landscape: Linking occupancy and traits of a diverse montane bat community to fire regime 2019 Blakey et al. Ecology and Evolution rnoaa
Climate change impact on ecosystem functions provided by birds in southeastern Amazonia 2019 Miranda et al. PLOS ONE rgbif
Transitioning from recruit to officer: An investigation of how stress appraisal and coping influence work engagement 2019 Rodrigues et al. International Journal of Selection and Assessment skimr
Dataset of Jaccard similarity indices from 1,597 European political manifestos across 27 countries (1945–2017 2019 Sanger & Warin Data in Brief textreuse
Paleoclimate, ecoregion size, and degree of isolation explain regional biodiversity differences among terrestrial vertebrates within the Congo Basin 2019 Perre et al. Belgian Journal of Zoology rgbif, rredlist
Pedestrian Count Expansion Methods: Bridging the Gap between Land Use Groups and Empirical Clusters 2019 Medury et al. Transportation Research Record: Journal of the Transportation Research Board FedData
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Space use and social association in a gregarious ungulate: Testing the conspecific attraction and resource dispersion hypotheses 2019 Peignier et al. Ecology and Evolution spatsoc
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Managerial Self-Attribution Bias and Banks’ Future Performance: Evidence from Emerging Economies 2019 Iqbal Journal of Risk and Financial Management pdftools
Greater vulnerability to warming of marine versus terrestrial ectotherms 2019 Pinsky et al. Nature rfishbase, rnoaa
Revisiting the classification of Melastomataceae: implications for habit and fruit evolution 2019 Bacci et al. Botanical Journal of the Linnean Society rgbif
Data extraction from digital repeat photography using xROI: An interactive framework to facilitate the process 2019 Seyednasrollah et al. ISPRS Journal of Photogrammetry and Remote Sensing plotly
Automated Dictionary Creation for Analyzing Text: An Illustration from Stereotype Content 2019 Nicolas et al. PsyArXiv hunspell
Resilience in social-ecological systems: identifying stable and unstable equilibria with agent-based models 2019 Van Strien et al. Ecology and Society plotly
Exploring the Daschle Collection using Text Mining 2019 Bayer & Michael arXiv hunspell, tesseract
Morphology, ecology, and biogeography of independent origins of cleaning behavior around the world 2019 Baliga & Mehta Integrative and comparative biology rgbif
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Turning the tables: A university league-table based on quality not quantity 2019 Barnett & Moher F1000Research rentrez
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Solvent Selection Methods and Tool 2019 Piccione et al. Organic Process Research & Development plotly
Application of Electronic Nose for Evaluation of Wastewater Treatment Process Effects at Full-Scale WWTP 2019 Łagód et al. Processes plotly
Coupling of Membrane Nanodomain Formation and Enhanced Electroporation near Phase Transition 2019 Kirsch & Böckmann Biophysical Journal plotly
Bony Patchwork: Mosaic Patterns of Evolution in the Skull of Electric Fishes 2019 Evans et al. Integrative and Comparative Biology phylotaR
Outstanding plant endemism levels strongly support the recognition of campo rupestre provinces in mountaintops of eastern South America 2019 Colli‐Silva et al. Journal of Biogeography CoordinateCleaner
An automated multi-model evapotranspiration mapping framework using remotely sensed and reanalysis data 2019 Bhattarai et al. Remote Sensing of Environment MODIStsp
Consequences of clear-cutting and drought on fine root dynamics down to 17 m in coppice-managed eucalypt plantations 2019 Germon et al. Forest Ecology and Management plotly
Swirling in the ocean: immature loggerhead turtles seasonally target old anticyclonic eddies at the fringe of the North Atlantic gyre 2019 Chambault et al. Progress in Oceanography clifro
Dual colonization of European high-altitude areas from Asia by Callianthemum (Ranunculaceae 2019 Kadereit et al. Plant Systematics and Evolution rgbif
Modelling the biochemical and sensory changes of strawberries during storage under diverse relative humidity conditions 2019 Ktenioudaki et al. Postharvest Biology and Technology writexl
Predicting malaria cases using remotely sensed environmental variables in Nkomazi, South Africa 2019 Adeola et al. Geospatial Health MODIStsp
Variability in growth and biomass allocation and the phenotypic plasticity of seven Prosopis pallida populations in response to water availability 2019 Salazar et al. Trees magick
Minimizing wildlife impacts for offshore wind energy development: Winning tradeoffs for seabirds in space and cetaceans in time 2019 Best & Halpin PLOS ONE plotly
The Gene Sculpt Suite: a set of tools for genome editing 2019 Mann et al. Nucleic Acids Research rentrez
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On the Matrix Condition of Phylogenetic Tree 2020 Jhwueng & O’Meara Evolutionary Bioinformatics rotl
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An Ontological Analysis and Natural Language Processing of Figures of Speech 2020 Panayiotou International Journal of Artificial Intelligence & Applications rdflib
Large-scale Quantification of Vertebrate Biodiversity in Ailaoshan Nature Reserve from Leech iDNA 2020 Ji et al. Cold Spring Harbor Laboratory rredlist
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Revisiting reptile home ranges: moving beyond traditional estimators with dynamic Brownian Bridge Movement Models 2020 Silva et al. Cold Spring Harbor Laboratory NLMR, landscapetools
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Experimental hybridization studies suggest that pleiotropic alleles commonly underlie adaptive divergence between natural populations 2020 Thompson The American Naturalist taxize, rentrez
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Substantial Antigenic Drift in the Hemagglutinin Protein of Swine Influenza A Viruses 2020 Ryt-Hansen et al. Viruses treeio
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Applied R in the Classroom 2020 Long & Turner Australian Economic Review skimr
Current and future global potential distribution of the fruit fly Drosophila suzukii (Diptera: Drosophilidae 2020 Reyes & Lira-Noriega The Canadian Entomologist spocc
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Global distribution of coral diversity: Biodiversity knowledge gradients related to spatial resolution 2020 Kusumoto et al. Ecological Research rgbif
Developmental cost theory predicts thermal environment and vulnerability to global warming 2020 Marshall et al. Nature Ecology & Evolution rotl
Integration of single nucleotide variants and whole-genome DNA methylation profiles for classification of rheumatoid arthritis cases from controls 2020 Amiri Roudbar et al. Heredity rsnps
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Three quarters of new criminological knowledge is hidden from policy makers 2020 Ashby Center for Open Science roadoi, rromeo
Using ggtree to Visualize Data on Tree‐Like Structures 2020 Yu Current Protocols in Bioinformatics treeio
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Pollinator niche partitioning and asymmetric facilitation contribute to the maintenance of diversity 2020 Wei et al. Cold Spring Harbor Laboratory rotl
Modeling the Popularity of Twitter Hashtags with Master Equations 2020 Fontanelli & Mansilla arXiv rtweet
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Assessing the Risk of Car Crashes in Road Networks 2020 Borgoni et al. Social Indicators Research osmdata
Identification of Trends in the Polish Media on the Example of the Quarterly Studia Medioznawcze The Use of Big Data Tools 2020 Pruchnik Media Studies hunspell
Egyptian Rousette IFN-ω Subtypes Elicit Distinct Antiviral Effects and Transcriptional Responses in Conspecific Cells 2020 Pavlovich et al. Frontiers in Immunology rentrez
Rise of the Machines? Examining the Influence of Social Bots on a Political Discussion Network 2020 Hagen et al. Social Science Computer Review rtweet
On new data sources for the production of official statistics 2020 Salgado & Oancea arXiv RSelenium
A database of freshwater fish species of the Amazon Basin 2020 Jézéquel et al. Scientific Data rfishbase
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Expression and Localization of Kcne2 in the Vertebrate Retina 2020 Lindner et al. Investigative Opthalmology & Visual Science rotl
Characterization of the chromatin accessibility in an Alzheimer’s disease (AD) mouse model 2020 Wang et al. Alzheimer’s Research & Therapy iheatmapr
Analysis of Dual Class I Histone Deacetylase and Lysine Demethylase Inhibitor Domatinostat (4SC-202) on Growth and Cellular and Genomic Landscape of Atypical Teratoid/Rhabdoid 2020 Hoffman et al. Cancers ijtiff
Efficient Bayesian Inference of General Gaussian Models on Large Phylogenetic Trees 2020 Bastide et al. arXiv treeio
Visualizing 50 Years of Cancer Mortality Rates Across the US at Multiple Geographic Levels Using a Synchronized Map and Graph Animation 2020 Michaels et al. Preventing Chronic Disease magick
Risk communication in tables versus text: a registered report randomized trial on “fact boxes 2020 Brick et al. Royal Society Open Science assertr
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The ghosts of forests past and future: deforestation and botanical sampling in the Brazilian Amazon 2020 Stropp et al. Ecography rgbif
20-MAD--20 Years of Issues and Commits of Mozilla and Apache Development 2020 Claes & Mäntylä arXiv tokenizers
Trait velocities reveal that mortality has driven widespread coordinated shifts in forest hydraulic trait composition 2020 Trugman et al. Proceedings of the National Academy of Sciences brranching
Mixture Touch: A Web Platform for the Evaluation of Complex Chemical Mixtures 2020 Zushi et al. ACS Omega webchem
Vocal learning: Beyond the continuum 2020 Martins & Boeckx PLOS Biology taxize
Synchronic and diachronic strategies of mora preservation in Gújjolaay Eegimaa 2020 Hantgan-Sonko Journal of African Languages and Literatures lingtypology
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Replacements of small- by large-ranged species scale up to diversity loss in Europe’s temperate forest biome 2020 Staude et al. Nature Ecology & Evolution scrubr
Latitudinal patterns of species richness and range size of ferns along elevational gradients at the transition from tropics to subtropics 2020 Hernández‐Rojas et al. Journal of Biogeography rgbif
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Molecular crosstalk between the endophyte Paraconiothyrium variabile and the phytopathogen Fusarium oxysporum – Modulation of lipoxygenase activity and beauvericin production during the interaction 2020 Bärenstrauch et al. Fungal Genetics and Biology rentrez
Commuting inequity and its determinants in Shanghai: New findings from big-data analytics 2020 Zhao & Cao Transport Policy stplanr
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Short Index of Job Satisfaction: Validity evidence from Portugal and Brazil 2020 Sinval & Marôco PLOS ONE skimr
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Ten questions concerning the microbiomes of buildings 2016 Adams et al. Building and Environment nlrx
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Rocket Science: The Effect of Spaceflight on Germination Physiology, Ageing, and Transcriptome of Eruca sativa Seeds 2020 Chandler et al. Life taxize
Identifying multiple learning spaces within a single teacher-focused Twitter hashtag 2020 Greenhalgh et al. Computers & Education rtweet
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Niche Models Differentiate Potential Impacts of Two Aquatic Invasive Plant Species on Native Macrophytes 2020 Verhoeven et al. Diversity taxize
Remdesivir: A Review of Its Discovery and Development Leading to Emergency Use Authorization for Treatment of COVID-19 2020 Eastman et al. ACS Central Science rnaturalearth
Interaction of Plastics with Marine Species 2020 Ozturk & Altinok Turkish Journal of Fisheries and Aquatic Sciences rnaturalearth
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A critical assessment of human-impact indices based on anthropogenic pollen indicators 2020 Deza-Araujo et al. Quaternary Science Reviews neotoma
Worldwide validation of 8 satellite-derived and reanalysis solar radiation products: A preliminary evaluation and overall metrics for hourly data over 27 years. Solar Energy 2020 Yang & Bright Solar Energy camsRad
How much research shared on Facebook happens outside of public pages and groups? A comparison of public and private online activity around PLOS ONE papers 2020 Enkhbayar et al. Quantitative Science Studies rplos
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The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma 2020 Kang et al. BioMed Research International UCSCXenaTools
Multi-dimensional machine learning approaches for fruit shape phenotyping in strawberry 2020 Feldmann et al. GigaScience magick
The social management of complex uncertainty: Central Bank similarity and crisis liquidity swaps at the Federal Reserve 2020 Marple The Review of International Organizations textreuse
The genetic basis of animal behavioural diversity in natural populations 2020 Bubac et al. Molecular Ecology rotl
Omics-wide quantitative B-cell infiltration analyses identify GPR18 for human cancer prognosis with superiority over CD20 2020 Liu et al. Communications Biology UCSCXenaTools
Model State Legislation and Intergovernmental Tensions over the Affordable Care Act, Common Core, and the Second Amendment 2020 Callaghan et al. Publius: The Journal of Federalism textreuse
Evaluation of plant sources for antiinfective lead compound discovery by correlating phylogenetic, spatial, and bioactivity data 2020 Holzmeyer et al. Proceedings of the National Academy of Sciences geonames
God Talk in a Digital Age: How Members of Congress Use Religious Language on Twitter 2020 Bramlett & Burge Politics and Religion rtweet
Measuring Media Content Concentration at a Large Scale Using Automated Text Comparisons 2020 Vogler et al. Journalism Studies textreuse
Standartox: Standardizing Toxicity Data 2020 Scharmüller et al. Data bib2df, plotly, rgbif, taxize, webchem
Factors affecting urban electricity consumption: a case study in the Bangkok Metropolitan Area using an integrated approach of earth observation data and data analysis 2020 Nguyen et al. Environmental Science and Pollution Research MODIStsp
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Use of random forest analysis to quantify the importance of the structural characteristics of beta-glucans for prebiotic development 2020 Lam et al. Food Hydrocolloids skimr
A high-quality genetic reference database for European commercial fishes reveals substitution fraud of processed Atlantic cod (Gadus morhua) and common sole (Solea solea) at different steps in the Belgian supply chain 2020 Deconinck et al. Food and Chemical Toxicology rnaturalearth
Specific leaf area is a potential indicator of tree species sensitive to future climate change in the mixed Subtropical Forests of southern Brazil 2020 Bohora Schlickmann et al. Ecological Indicators rgbif
Group segmentation and heterogeneity in the choice of cooking fuels in post-earthquake Nepal 2020 Shrestha & Shrestha arXiv geojsonio
Identifying Suspect Bat Reservoirs of Emerging Infections 2020 Crowley et al. Vaccines rotl, taxize
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Urban aliens and threatened near-naturals: Land-cover affects the species richness of alien- and threatened species in an urban-rural setting 2020 Petersen et al. Scientific Reports rgbif
Increased above‐ground resource allocation is a likely precursor for independent evolutionary origins of annuality in the Pooideae grass subfamily 2020 Lindberg et al. New Phytologist rgbif
Species better track climate warming in the oceans than on land 2020 Lenoir et al. Nature Ecology & Evolution taxize, rgbif
Follicular extracellular vesicles enhance meiotic resumption of domestic cat vitrified oocytes 2020 De Almeida Monteiro Melo Ferraz et al. Scientific Reports rentrez
A decade of movement ecology 2020 Joo et al. arXiv fulltext
Climate and competition influence sockeye salmon population dynamics across the Northeast Pacific Ocean 2020 Connors et al. Canadian Journal of Fisheries and Aquatic Sciences rnaturalearth
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Trophic innovations fuel reef fish diversification 2020 Siqueira et al. Nature Communications rfishbase
Sustainable and resilient strategies for touristic cities against COVID-19 2020 D'Orazio et al. arXiv nlrx
A guide to using the Internet to monitor and quantify the wildlife trade 2020 Stringham et al. EcoEvoRxiv RSelenium, taxize
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Growing Influence of University PR on Science News Coverage? A Longitudinal Automated Content Analysis of University Media Releases and Newspaper Coverage in Switzerland, 2003‒2017 2020 Vogler & Schäfer International Journal of Communication textreuse
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An experimental test of the capacity for long-distance dispersal of freshwater diatoms adhering to waterfowl plumage 2020 Manning et al. Center for Open Science rdryad
The Topics-scape of the Pandemic Crisis: The Italian Sentiment on Political Leaders 2020 Greco & La Rocca Culture e Studi del Sociale rtweet
Could climate trends disrupt the contact rates between Ixodes ricinus (Acari, Ixodidae) and the reservoirs of Borrelia burgdorferi s.l.? 2020 Fernández-Ruiz & Estrada-Peña PLOS ONE MODIStsp
Climate, and not fire, drives the phylogenetic clustering of species with hard-coated seeds in Mediterranean Basin communities 2020 Santana et al. Perspectives in Plant Ecology, Evolution and Systematics brranching
Climate niche mismatch and the collapse of primate seed dispersal services in the Amazon 2020 Sales et al. Biological Conservation spocc
Focus and social contagion of environmental organization advocacy on Twitter 2020 Barrios‐O’Neill Conservation Biology rtweet
Biogeography and ecological niche evolution in Diapensiaceae inferred from phylogenetic analysis 2020 Gaynor et al. Journal of Systematics and Evolution spocc, CoordinateCleaner
Optimal MODIS data processing for accurate multi-year paddy rice area mapping in China 2020 Liu et al. GIScience & Remote Sensing MODIStsp
A community approach to the Neotropical ticks-hosts interactions 2020 Estrada-Peña et al. Scientific Reports rotl
Multivariate Functional Singular Spectrum Analysis Over Different Dimensional Domains 2020 Trinka et al. arXiv MODISTools
Extraction on Paper Activity: An Active Learning Technique to Facilitate Student Understanding of Liquid–Liquid Extraction 2020 McKnelly et al. Journal of Chemical Education skimr
Morphologically similar but not closely related: the long-spored species of Subulicystidium (Trechisporales, Basidiomycota 2020 Ordynets et al. Mycological Progress treeio
Independent and dependent possessive person forms 2020 Ye Studies in Language lingtypology
Dietary generalism accelerates arrival and persistence of coral‐reef fishes in their novel ranges under climate change 2020 Monaco et al. Global Change Biology taxize, rfishbase
Climate drivers of plague epidemiology in British India, 1898–1949 2020 Tennant et al. Proceedings of the Royal Society B: Biological Sciences tesseract
Pan-Arctic analysis of cultural ecosystem services using social media and automated content analysis 2020 Runge et al. Environmental Research Communications rnaturalearth
Movement of St. Louis encephalitis virus in the Western United States, 2014- 2018 2020 Swetnam et al. PLOS Neglected Tropical Diseases rnaturalearth
The impact of COVID-19 and strategies for mitigation and suppression in low- and middle-income countries 2020 Walker et al. Science rdhs
Words ranking and Hirsch index for identifying the core of the hapaxes in political texts 2020 Ficcadenti et al. Journal of Informetrics hunspell
Forty-four years of global trade in CITES-listed snakes: Trends and implications for conservation and public health 2020 Hierink et al. Biological Conservation rcites, citesdb
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Co-occurrence networks of Twitter content after manual or automatic processing. A case-study on “gluten-free 2020 Puerta et al. Food Quality and Preference rtweet
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Climate warming moderates the impacts of introduced sportfish on multiple dimensions of prey biodiversity 2020 Loewen et al. Global Change Biology taxize
Flight to Safety: 2020 Democratic Primary Election Results and COVID-19 2020 Bisbee & Honig Covid Economics RSelenium
Occupancy‐derived thermal affinities reflect known physiological thermal limits of marine species 2020 Webb et al. Ecology and Evolution worrms
Changes in taxonomic and phylogenetic diversity in the Anthropocene 2020 Li et al. Proceedings of the Royal Society B: Biological Sciences taxize
The internationalization of European financial networks: a quantitative text analysis of EU consultation responses 2020 James et al. Review of International Political Economy textreuse
LTRpred: de novo annotation of intact retrotransposons 2020 Drost Journal of Open Source Software biomartr
Long-term monitoring of the Iberian ibex population in the Sierra Nevada of the southeast Iberian Peninsula 2020 Granados et al. Scientific Data finch
Areas of endemism on Brazilian mountaintops revealed by taxonomically verified records of Microlicieae (Melastomataceae 2020 Pacifico et al. Phytotaxa CoordinateCleaner
Preceding Fall Drought Conditions and Overwinter Precipitation Effects on Spring Wildland Fire Activity in Canada 2020 Hanes et al. Fire weathercan
Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum 2020 Burda et al. Cell Reports rotl
Locked in Syndrome Machine Learning Classification using Sentence Comprehension EEG Data 2020 Corput arXiv osfr
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Elusive consensus: Polarization in elite communication on the COVID-19 pandemic 2020 Green et al. Science Advances rtweet
Investigate the sensitivity of the satellite-based agricultural drought indices to monitor the drought condition of paddy and introduction to enhanced multi-temporal agricultural drought indices 2020 Jayawardhana & Chathurange J Remote Sens GIS MODIStsp
Forecasting Brazilian and American COVID-19 cases based on artificial intelligence coupled with climatic exogenous variables 2020 Da Silva et al. Chaos, Solitons & Fractals rnoaa
The R Language as a Tool for Biometeorological Research 2020 Charalampopoulos Atmosphere rnoaa, rWBclimate, nasapower
Integrated pharmaco-proteogenomics defines two subgroups in isocitrate dehydrogenase wild-type glioblastoma with prognostic and therapeutic opportunities 2020 Oh et al. Nature Communications rentrez
Recent accelerated diversification in rosids occurred outside the tropics 2020 Sun et al. Nature Communications rgbif
Foraging habitat determines predator–prey size relationships in marine fishes 2020 Griffiths Journal of Fish Biology rfishbase
Chloroplast DNA analysis of the invasive weed, Himalayan balsam (Impatiens glandulifera), in the British Isles 2020 Kurose et al. Scientific Reports rnaturalearth
Natural variations in brain morphology do not account for inter-individual differences in defensive responding during fear acquisition training and extinction 2020 Ehlers et al. PsyArXiv writexl
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Transfer learning of regression models from a sequence of datasets by penalized estimation 2020 Wieringen & Binder arXiv fingertipsR
Native distribution characteristics rather than functional traits explain preadaptation of invasive species to high‐UV‐B environments 2020 Hock et al. Diversity and Distributions rgbif
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